JCVI/AADR Fall Focused Symposium:
Integrating Omic Datasets Towards Translation
November 14-15, 2019
The J. Craig Venter Institute, La Jolla, Calif.
Hotel Accommodations: Hilton Canopy Hotel, 7955 La Jolla Shores Dr, La Jolla, CA 92037
Meeting Location: The J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA 92037
Sessions and speakers are subject to change. Each session will have assigned moderators and panel discussions.
This symposium is supported (in part) by the Task Force on Design & Analysis in Oral Health Research.
Thursday, November 14
Registration and Poster Setup
1:15 p.m. - 1:40 p.m.
1:15-1:25 Marcelo Freire, Associate Professor, J Craig Venter Institute
Welcoming and Opening Remarks from JCVI
1:25-1:30 J. Timothy Wright, AADR President and Professor, University of North Carolina Chapel Hill
Welcome and Opening Remarks from AADR
1:30-1:40 Sebastian Ciancio, Task Force on Design and Analysis on Oral Health Research
Welcome and Opening Remarks from TFDA
1:40 p.m. - 4:30 p.m.
||Session I: Introduction to Multiomic Approaches
Goal: To Discuss Novel Methods to Capture the Complexity of the Human Oral Microbiome and Host Interactions.
Session Chair: Marcelo Freire
1:45-2:35 Karen Nelson, President, J. Craig Venter Institute, Calif.
Oral Microbiome and Human Health and Disease
2:50-3:40 Peer Bork, Professor, European Molecular Biology Laboratory, Heidelberg, Germany
The Oral-Gut Connection: Axis and its Clinical Relevance
3:20-4:15 Stefan Ruhl, Professor, University at Buffalo School of Dental Medicine, Department of Oral Biology
The Human Salivary Proteome Wiki: An Emerging Platform to Connect Genome,
Proteome, Glycome, and Microbiome
4:15-4:30 Panel Discussion
4:30 p.m. - 6 p.m.
||Poster Presentations and Networking Reception
7 p.m. - 9 p.m.
||Speakers Dinner (invitation only) - Cusp, 11th Floor, Hilton Canopy Hotel La Jolla
Friday, November 15
|8:30 a.m. - 10 a.m.
||Session II - Predictive Value of Metatranscriptomics
Goal: To Evaluate the Role of Microbial Transcriptomics in Shaping Human Phenotypes.
Session Chair: Maria Ryan
8:30-9 Anna Edlund, J. Craig Venter Institute
The Multiomics Promise of the Oral Microbiome
9-9:45 Scott T. Kelly, San Diego State University. Calif.
Clinical Relevance of Multiomics in Periodontal Treatments
9:45-10 Panel Discussion
||15 MINS BREAK
|10:15 a.m. - 11:50 a.m.
||Session III-Functional Characterization by Metabolomics
Goal: Making Connections, of Precision Medicine, Microbiome and Metabolomics.
Session Chair: Sebastian Ciancio
10:15-10:45 Erica Forsberg, San Diego State University, Calif.
Integration of Metagenomics Models and Metabolomics using Uncharacterized Microbes
10:45-11:20 Peter Dorrestein, Professor, University of California,
Metabolomics Methods in Saliva of Caries Patients
11:20-11:50 Panel Discussion
|11:50 a.m. - 12:50 p.m.
||Interactive Lunch Workshop
Presenter: Deborah Dawson, University of Iowa
Goal: Fostering Junior and Senior Scientists’ Interactivity and Multidisciplinary Exchanges.
1 p.m - 2:30 p.m.
||Session IV: Genomics and Metagenomes
Goal: Revealing the Role of Host and Microbial Genomics in Diagnostics.
Session Chair: Marcelo Freire
1-1:30 Dmitry Shungin DDS MPH PhD
Research Career Development Fellow, Broad Institute of Harvard and MIT
Contextualization of GWAS in Dental and Craniofacial Disorders
1:30-2 Sean Gibbons, Washington Research Foundation Distinguished Investigator and Assistant Professor, at the Institute for Systems Biology
Integration of Metabolic Models with Amplicon and Full Genomes
2-2:30 Panel Discussion
2:30 p.m. - 2:45 p.m.
||15 MINS BREAK
2:45 p.m. - 4 p.m.
Session V- Novel Host-Microbiome Biomarkers
Goal: Identification of Novel Host-microbial Markers in Health and Disease
Session Chair: Anna Edlund
2:45-3:15 Jorge Frias-Lopez, University of Florida, Gainesville
Host-Microbial Heterogeneity in Periodontal Diseases and Oral Cancer
3:15-3:45 Marcelo Freire, Associate Professor, J. Craig Venter Institute
Harnessing Biomarkers from Host-Microbiome Interactions
3:45-4 Panel Discussion
4 p.m. - 5 p.m.
Final Remarks and Next Steps
Goal: Exploring NIDCR goals and Future Initiatives
Session Chair: Lillian Shum
4-5 Lillian Shum, Director, Division of Extramural Research, National Institute of Dental and Craniofacial Research, Bethesda, Md.
Sunset View and Departures
Hosted by the J. Craig Venture Institute, sponsored by the American Association for Dental Research and Supported, in part, by an unrestricted educational grant from the Task Force on Design and Analysis in Oral Health Research